This gear coordinates the data quality checks for a given participant. It internally triggers the Form QC Checker gear to validate each visit.
- Visits are evaluated in the order of the visit date.
- If a visit fails validation, none of the subsequent visits will be evaluated until the failed visit is fixed.
- If a visit is modified, all the subsequent visits are re-evaluated for accuracy.
Environment
This gear uses the AWS SSM parameter store, and expects that AWS credentials are available in environment variables (AWS_SECRET_ACCESS_KEY, AWS_ACCESS_KEY_ID, AWS_DEFAULT_REGION) within the Flywheel runtime.
Running
This gear can only be triggered by submission pipeline or finalization pipeline.
- visits_file: Input file to trigger the QC process for this participant. Example
- form_configs_file: A JSON file with forms module configurations. Example
- qc_configs_file: JSON file with QC gear config information. Example
Configs
Gear configs are defined in manifest.json.